Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc116Q80X53 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Phf7-203ENSMUST00000226565 1971 ntBASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Gm13186-201ENSMUST00000118031 316 ntBASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.28■□□□□ 0.2
Ccdc116Q80X53 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc116Q80X53 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc116Q80X53 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc116Q80X53 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc116Q80X53 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc116Q80X53 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc116Q80X53 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.27■□□□□ 0.2
Ccdc116Q80X53 Gm11539-201ENSMUST00000119837 557 ntBASIC16.27■□□□□ 0.2
Ccdc116Q80X53 Gm13436-201ENSMUST00000120418 567 ntBASIC16.27■□□□□ 0.2
Ccdc116Q80X53 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc116Q80X53 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc116Q80X53 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc116Q80X53 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc116Q80X53 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc116Q80X53 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc116Q80X53 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc116Q80X53 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc116Q80X53 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc116Q80X53 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc116Q80X53 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc116Q80X53 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc116Q80X53 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Gm30025-201ENSMUST00000218555 728 ntBASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc116Q80X53 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc116Q80X53 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms