Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Mir8112-201ENSMUST00000184382 131 ntBASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.15■□□□□ 0.66
Prpf40bQ80W14 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.15■□□□□ 0.66
Prpf40bQ80W14 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40bQ80W14 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40bQ80W14 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40bQ80W14 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40bQ80W14 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40bQ80W14 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.14■□□□□ 0.65
Prpf40bQ80W14 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Prpf40bQ80W14 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.14■□□□□ 0.65
Prpf40bQ80W14 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.14■□□□□ 0.65
Prpf40bQ80W14 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40bQ80W14 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40bQ80W14 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Prpf40bQ80W14 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40bQ80W14 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40bQ80W14 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.14■□□□□ 0.65
Prpf40bQ80W14 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40bQ80W14 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40bQ80W14 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40bQ80W14 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms