Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Usp8Q80U87 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Usp8Q80U87 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Usp8Q80U87 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.7■□□□□ 0.26
Usp8Q80U87 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp8Q80U87 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Usp8Q80U87 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp8Q80U87 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp8Q80U87 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Usp8Q80U87 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Usp8Q80U87 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp8Q80U87 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.69■□□□□ 0.26
Usp8Q80U87 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp8Q80U87 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp8Q80U87 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp8Q80U87 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp8Q80U87 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.68■□□□□ 0.26
Usp8Q80U87 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp8Q80U87 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Usp8Q80U87 Gm8520-201ENSMUST00000186517 868 ntBASIC16.68■□□□□ 0.26
Usp8Q80U87 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp8Q80U87 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.68■□□□□ 0.26
Usp8Q80U87 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp8Q80U87 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Usp8Q80U87 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp8Q80U87 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp8Q80U87 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.67■□□□□ 0.26
Usp8Q80U87 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Usp8Q80U87 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Usp8Q80U87 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Usp8Q80U87 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Usp8Q80U87 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.67■□□□□ 0.26
Usp8Q80U87 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Usp8Q80U87 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Usp8Q80U87 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Usp8Q80U87 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp8Q80U87 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp8Q80U87 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Usp8Q80U87 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp8Q80U87 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.66■□□□□ 0.26
Usp8Q80U87 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp8Q80U87 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp8Q80U87 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.66■□□□□ 0.26
Usp8Q80U87 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp8Q80U87 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.66■□□□□ 0.26
Usp8Q80U87 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp8Q80U87 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp8Q80U87 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Usp8Q80U87 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp8Q80U87 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp8Q80U87 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp8Q80U87 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Usp8Q80U87 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp8Q80U87 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.65■□□□□ 0.26
Usp8Q80U87 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Usp8Q80U87 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Usp8Q80U87 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Usp8Q80U87 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp8Q80U87 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Usp8Q80U87 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp8Q80U87 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Usp8Q80U87 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.65■□□□□ 0.26
Usp8Q80U87 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp8Q80U87 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp8Q80U87 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Usp8Q80U87 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Usp8Q80U87 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Usp8Q80U87 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp8Q80U87 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Usp8Q80U87 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp8Q80U87 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms