Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC25.74■■□□□ 1.71
Rpap1Q80TE0 Gm42939-201ENSMUST00000197514 2205 ntBASIC25.74■■□□□ 1.71
Rpap1Q80TE0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC25.74■■□□□ 1.71
Rpap1Q80TE0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Rpap1Q80TE0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Rpap1Q80TE0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Rpap1Q80TE0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Rpap1Q80TE0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rpap1Q80TE0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
Rpap1Q80TE0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Rpap1Q80TE0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rpap1Q80TE0 Gm6184-201ENSMUST00000120403 1261 ntBASIC25.73■■□□□ 1.71
Rpap1Q80TE0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC25.73■■□□□ 1.71
Rpap1Q80TE0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Rpap1Q80TE0 AC090659.1-201ENSMUST00000224334 768 ntBASIC25.73■■□□□ 1.71
Rpap1Q80TE0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rpap1Q80TE0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC25.73■■□□□ 1.71
Rpap1Q80TE0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rpap1Q80TE0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC25.73■■□□□ 1.71
Rpap1Q80TE0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rpap1Q80TE0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Rpap1Q80TE0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rpap1Q80TE0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rpap1Q80TE0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rpap1Q80TE0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC25.72■■□□□ 1.71
Rpap1Q80TE0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rpap1Q80TE0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rpap1Q80TE0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rpap1Q80TE0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rpap1Q80TE0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rpap1Q80TE0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rpap1Q80TE0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rpap1Q80TE0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Gm16499-203ENSMUST00000204633 2177 ntBASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 AC084391.1-201ENSMUST00000200651 141 ntBASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rpap1Q80TE0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
Rpap1Q80TE0 Gm43182-201ENSMUST00000199476 2528 ntBASIC25.7■■□□□ 1.71
Rpap1Q80TE0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Rpap1Q80TE0 Gm43808-201ENSMUST00000202534 2065 ntBASIC25.7■■□□□ 1.71
Rpap1Q80TE0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rpap1Q80TE0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.7
Rpap1Q80TE0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rpap1Q80TE0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
Rpap1Q80TE0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rpap1Q80TE0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Rpap1Q80TE0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC25.7■■□□□ 1.7
Rpap1Q80TE0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC25.7■■□□□ 1.7
Rpap1Q80TE0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Gm37500-201ENSMUST00000192059 1443 ntBASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Gm9172-201ENSMUST00000212092 954 ntBASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Dmtn-207ENSMUST00000228001 2437 ntBASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Gm11620-201ENSMUST00000118770 1845 ntBASIC25.69■■□□□ 1.7
Rpap1Q80TE0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rpap1Q80TE0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rpap1Q80TE0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rpap1Q80TE0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rpap1Q80TE0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rpap1Q80TE0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
Rpap1Q80TE0 Gm25406-201ENSMUST00000157599 105 ntBASIC25.68■■□□□ 1.7
Rpap1Q80TE0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rpap1Q80TE0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Rpap1Q80TE0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Rpap1Q80TE0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rpap1Q80TE0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC25.67■■□□□ 1.7
Rpap1Q80TE0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC25.67■■□□□ 1.7
Rpap1Q80TE0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Rpap1Q80TE0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC25.67■■□□□ 1.7
Rpap1Q80TE0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC25.67■■□□□ 1.7
Rpap1Q80TE0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Rpap1Q80TE0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Rpap1Q80TE0 Gm5837-201ENSMUST00000191844 1369 ntBASIC25.67■■□□□ 1.7
Rpap1Q80TE0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rpap1Q80TE0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms