Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Gm5682-201ENSMUST00000173402 505 ntBASIC11.35□□□□□ -0.59
Csmd3Q80T79 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.35□□□□□ -0.59
Csmd3Q80T79 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.34□□□□□ -0.59
Csmd3Q80T79 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.34□□□□□ -0.59
Csmd3Q80T79 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.34□□□□□ -0.59
Csmd3Q80T79 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Gm25745-201ENSMUST00000174945 133 ntBASIC11.34□□□□□ -0.59
Csmd3Q80T79 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 AA543401-201ENSMUST00000164248 1269 ntBASIC11.34□□□□□ -0.59
Csmd3Q80T79 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.34□□□□□ -0.59
Csmd3Q80T79 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Csmd3Q80T79 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.33□□□□□ -0.6
Csmd3Q80T79 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.33□□□□□ -0.6
Csmd3Q80T79 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.33□□□□□ -0.6
Csmd3Q80T79 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Gm4459-201ENSMUST00000118750 468 ntBASIC11.33□□□□□ -0.6
Csmd3Q80T79 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Csmd3Q80T79 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Zcchc6-207ENSMUST00000225576 2499 ntBASIC11.32□□□□□ -0.6
Csmd3Q80T79 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Gm29707-201ENSMUST00000196325 491 ntBASIC11.32□□□□□ -0.6
Csmd3Q80T79 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.32□□□□□ -0.6
Csmd3Q80T79 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.32□□□□□ -0.6
Csmd3Q80T79 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.32□□□□□ -0.6
Csmd3Q80T79 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms