Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf38bQ80SY5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf38bQ80SY5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf38bQ80SY5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf38bQ80SY5 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.33■□□□□ 0.37
Prpf38bQ80SY5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.33■□□□□ 0.37
Prpf38bQ80SY5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf38bQ80SY5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf38bQ80SY5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Gm8000-201ENSMUST00000188378 592 ntBASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf38bQ80SY5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Idnk-204ENSMUST00000226010 1898 ntBASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38bQ80SY5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Mir770-201ENSMUST00000103252 94 ntBASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Olfr129-201ENSMUST00000122318 993 ntBASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38bQ80SY5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38bQ80SY5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38bQ80SY5 Gm12895-201ENSMUST00000122214 226 ntBASIC17.3■□□□□ 0.36
Prpf38bQ80SY5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.3■□□□□ 0.36
Prpf38bQ80SY5 Gm2651-201ENSMUST00000203560 838 ntBASIC17.3■□□□□ 0.36
Prpf38bQ80SY5 Il3ra-202ENSMUST00000223589 738 ntBASIC17.3■□□□□ 0.36
Prpf38bQ80SY5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38bQ80SY5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Prpf38bQ80SY5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.3■□□□□ 0.36
Prpf38bQ80SY5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38bQ80SY5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38bQ80SY5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms