Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Gm37722-201ENSMUST00000193757 208 ntBASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Gm18421-201ENSMUST00000204122 625 ntBASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Exosc3Q7TQK4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Gm29707-201ENSMUST00000196325 491 ntBASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Exosc3Q7TQK4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 Gm9013-201ENSMUST00000132939 882 ntBASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 Gm6659-201ENSMUST00000174752 547 ntBASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.27■□□□□ 0.04
Exosc3Q7TQK4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Exosc3Q7TQK4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Exosc3Q7TQK4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Exosc3Q7TQK4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Exosc3Q7TQK4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Exosc3Q7TQK4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Exosc3Q7TQK4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Exosc3Q7TQK4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Exosc3Q7TQK4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Exosc3Q7TQK4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Exosc3Q7TQK4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms