Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx55Q6ZPL9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx55Q6ZPL9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Gm4995-201ENSMUST00000117247 432 ntBASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Gm14494-201ENSMUST00000118786 435 ntBASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Gm14140-201ENSMUST00000119999 995 ntBASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Gm11780-201ENSMUST00000136880 516 ntBASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Gm6550-201ENSMUST00000187574 993 ntBASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ddx55Q6ZPL9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ddx55Q6ZPL9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ddx55Q6ZPL9 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.89■□□□□ 0.62
Ddx55Q6ZPL9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Gm8097-201ENSMUST00000117903 829 ntBASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Gm12497-201ENSMUST00000138778 237 ntBASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx55Q6ZPL9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Gm23935-201ENSMUST00000102303 57 ntBASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Gm24270-201ENSMUST00000102326 57 ntBASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Gm4459-201ENSMUST00000118750 468 ntBASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Gm24245-201ENSMUST00000157318 57 ntBASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Gm2756-201ENSMUST00000195851 400 ntBASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx55Q6ZPL9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Gm27628-201ENSMUST00000184911 107 ntBASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Gm8969-201ENSMUST00000199694 526 ntBASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx55Q6ZPL9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx55Q6ZPL9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms