Protein–RNA interactions for Protein: Q6PE55

Pdgfrl, Platelet-derived growth factor receptor-like protein, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrlQ6PE55 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PdgfrlQ6PE55 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Gm6376-201ENSMUST00000209407 580 ntBASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PdgfrlQ6PE55 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PdgfrlQ6PE55 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PdgfrlQ6PE55 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PdgfrlQ6PE55 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PdgfrlQ6PE55 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PdgfrlQ6PE55 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PdgfrlQ6PE55 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.08■□□□□ 0.33
PdgfrlQ6PE55 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PdgfrlQ6PE55 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfrlQ6PE55 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.08■□□□□ 0.32
PdgfrlQ6PE55 AW822252-206ENSMUST00000208904 237 ntBASIC17.08■□□□□ 0.32
PdgfrlQ6PE55 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PdgfrlQ6PE55 Gm6296-201ENSMUST00000222599 943 ntBASIC17.08■□□□□ 0.32
PdgfrlQ6PE55 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.08■□□□□ 0.32
PdgfrlQ6PE55 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfrlQ6PE55 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfrlQ6PE55 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfrlQ6PE55 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PdgfrlQ6PE55 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.08■□□□□ 0.32
PdgfrlQ6PE55 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PdgfrlQ6PE55 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms