Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 AC154757.1-201ENSMUST00000228289 336 ntBASIC21.65■■□□□ 1.06
Chd4Q6PDQ2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chd4Q6PDQ2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC21.64■■□□□ 1.06
Chd4Q6PDQ2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Chd4Q6PDQ2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chd4Q6PDQ2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Chd4Q6PDQ2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chd4Q6PDQ2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chd4Q6PDQ2 Gm11780-201ENSMUST00000136880 516 ntBASIC21.64■■□□□ 1.05
Chd4Q6PDQ2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chd4Q6PDQ2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Chd4Q6PDQ2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC21.64■■□□□ 1.05
Chd4Q6PDQ2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.64■■□□□ 1.05
Chd4Q6PDQ2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chd4Q6PDQ2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Gm6089-201ENSMUST00000197666 938 ntBASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Psmb5-202ENSMUST00000227257 622 ntBASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd4Q6PDQ2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 Mir6404-201ENSMUST00000183699 94 ntBASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 AC084391.1-201ENSMUST00000200651 141 ntBASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd4Q6PDQ2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC21.61■■□□□ 1.05
Chd4Q6PDQ2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chd4Q6PDQ2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC21.61■■□□□ 1.05
Chd4Q6PDQ2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC21.61■■□□□ 1.05
Chd4Q6PDQ2 Gm13418-201ENSMUST00000119097 944 ntBASIC21.61■■□□□ 1.05
Chd4Q6PDQ2 Gm5682-201ENSMUST00000173402 505 ntBASIC21.61■■□□□ 1.05
Chd4Q6PDQ2 Gm27628-201ENSMUST00000184911 107 ntBASIC21.61■■□□□ 1.05
Chd4Q6PDQ2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chd4Q6PDQ2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chd4Q6PDQ2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chd4Q6PDQ2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chd4Q6PDQ2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC21.61■■□□□ 1.05
Chd4Q6PDQ2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC21.61■■□□□ 1.05
Chd4Q6PDQ2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd4Q6PDQ2 Gm8784-201ENSMUST00000222096 1435 ntBASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms