Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc2Q6PDG5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smarcc2Q6PDG5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smarcc2Q6PDG5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc2Q6PDG5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc2Q6PDG5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Smarcc2Q6PDG5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc2Q6PDG5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc2Q6PDG5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc2Q6PDG5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Smarcc2Q6PDG5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc2Q6PDG5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Smarcc2Q6PDG5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc2Q6PDG5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Smarcc2Q6PDG5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc2Q6PDG5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Gm6659-201ENSMUST00000174752 547 ntBASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc2Q6PDG5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc2Q6PDG5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc2Q6PDG5 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.37■□□□□ 0.69
Smarcc2Q6PDG5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc2Q6PDG5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc2Q6PDG5 Gm7213-201ENSMUST00000215977 950 ntBASIC19.37■□□□□ 0.69
Smarcc2Q6PDG5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.37■□□□□ 0.69
Smarcc2Q6PDG5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc2Q6PDG5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc2Q6PDG5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc2Q6PDG5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc2Q6PDG5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarcc2Q6PDG5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Gm13186-201ENSMUST00000118031 316 ntBASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Mir1668-201ENSMUST00000184114 107 ntBASIC19.35■□□□□ 0.69
Smarcc2Q6PDG5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms