Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Herc4Q6PAV2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Herc4Q6PAV2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Herc4Q6PAV2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Herc4Q6PAV2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Herc4Q6PAV2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Herc4Q6PAV2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Herc4Q6PAV2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Herc4Q6PAV2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Herc4Q6PAV2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Herc4Q6PAV2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.38■□□□□ 0.53
Herc4Q6PAV2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Herc4Q6PAV2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.37■□□□□ 0.53
Herc4Q6PAV2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Herc4Q6PAV2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Gm26039-201ENSMUST00000158152 144 ntBASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Herc4Q6PAV2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Herc4Q6PAV2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Herc4Q6PAV2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Herc4Q6PAV2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Herc4Q6PAV2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Herc4Q6PAV2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Herc4Q6PAV2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Herc4Q6PAV2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Herc4Q6PAV2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms