Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smarcd3Q6P9Z1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smarcd3Q6P9Z1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Gm12527-201ENSMUST00000117967 564 ntBASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Gm15378-201ENSMUST00000121894 207 ntBASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcd3Q6P9Z1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd3Q6P9Z1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd3Q6P9Z1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd3Q6P9Z1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd3Q6P9Z1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.27■□□□□ 0.03
Smarcd3Q6P9Z1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Smarcd3Q6P9Z1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd3Q6P9Z1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd3Q6P9Z1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcd3Q6P9Z1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcd3Q6P9Z1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcd3Q6P9Z1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms