Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.62■□□□□ 0.57
Abcf1Q6P542 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.62■□□□□ 0.57
Abcf1Q6P542 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abcf1Q6P542 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Abcf1Q6P542 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Abcf1Q6P542 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.62■□□□□ 0.57
Abcf1Q6P542 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abcf1Q6P542 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abcf1Q6P542 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abcf1Q6P542 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Abcf1Q6P542 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abcf1Q6P542 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abcf1Q6P542 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abcf1Q6P542 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Abcf1Q6P542 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Abcf1Q6P542 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Abcf1Q6P542 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Abcf1Q6P542 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.6■□□□□ 0.57
Abcf1Q6P542 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Gm37444-201ENSMUST00000193605 439 ntBASIC18.6■□□□□ 0.57
Abcf1Q6P542 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Abcf1Q6P542 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abcf1Q6P542 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Abcf1Q6P542 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Abcf1Q6P542 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Abcf1Q6P542 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abcf1Q6P542 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abcf1Q6P542 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.59■□□□□ 0.57
Abcf1Q6P542 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Abcf1Q6P542 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abcf1Q6P542 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Abcf1Q6P542 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Abcf1Q6P542 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Abcf1Q6P542 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Abcf1Q6P542 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Abcf1Q6P542 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Abcf1Q6P542 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.58■□□□□ 0.56
Abcf1Q6P542 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abcf1Q6P542 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abcf1Q6P542 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Abcf1Q6P542 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms