Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm10566-201ENSMUST00000086739 996 ntBASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Mir1668-201ENSMUST00000184114 107 ntBASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Casc4Q6P2L7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Gm22697-201ENSMUST00000175194 63 ntBASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Casc4Q6P2L7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Casc4Q6P2L7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Gm10013-201ENSMUST00000106074 672 ntBASIC16.81■□□□□ 0.28
Casc4Q6P2L7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Gm18101-201ENSMUST00000215769 548 ntBASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Casc4Q6P2L7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Gm13216-201ENSMUST00000117145 591 ntBASIC16.8■□□□□ 0.28
Casc4Q6P2L7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Casc4Q6P2L7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms