Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac4Q6NZM9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac4Q6NZM9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
Hdac4Q6NZM9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac4Q6NZM9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac4Q6NZM9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac4Q6NZM9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac4Q6NZM9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac4Q6NZM9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac4Q6NZM9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac4Q6NZM9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Hdac4Q6NZM9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac4Q6NZM9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac4Q6NZM9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hdac4Q6NZM9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.59■□□□□ 0.57
Hdac4Q6NZM9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
Hdac4Q6NZM9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hdac4Q6NZM9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hdac4Q6NZM9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hdac4Q6NZM9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hdac4Q6NZM9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac4Q6NZM9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac4Q6NZM9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.58■□□□□ 0.56
Hdac4Q6NZM9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac4Q6NZM9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac4Q6NZM9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac4Q6NZM9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac4Q6NZM9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac4Q6NZM9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac4Q6NZM9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.58■□□□□ 0.56
Hdac4Q6NZM9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac4Q6NZM9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac4Q6NZM9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac4Q6NZM9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.57■□□□□ 0.56
Hdac4Q6NZM9 Gm6433-201ENSMUST00000118634 875 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms