Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sp140Q6NSQ5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Gm11539-201ENSMUST00000119837 557 ntBASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Gm13436-201ENSMUST00000120418 567 ntBASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sp140Q6NSQ5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sp140Q6NSQ5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 Phf7-203ENSMUST00000226565 1971 ntBASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sp140Q6NSQ5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sp140Q6NSQ5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Gm13186-201ENSMUST00000118031 316 ntBASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.84■□□□□ 0.29
Sp140Q6NSQ5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms