Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pds5aQ6A026 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pds5aQ6A026 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Pds5aQ6A026 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pds5aQ6A026 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Pds5aQ6A026 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pds5aQ6A026 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.9■□□□□ 0.46
Pds5aQ6A026 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pds5aQ6A026 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.9■□□□□ 0.46
Pds5aQ6A026 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.9■□□□□ 0.46
Pds5aQ6A026 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pds5aQ6A026 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pds5aQ6A026 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pds5aQ6A026 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pds5aQ6A026 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pds5aQ6A026 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pds5aQ6A026 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pds5aQ6A026 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pds5aQ6A026 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.89■□□□□ 0.45
Pds5aQ6A026 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pds5aQ6A026 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.89■□□□□ 0.45
Pds5aQ6A026 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pds5aQ6A026 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Pds5aQ6A026 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pds5aQ6A026 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pds5aQ6A026 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pds5aQ6A026 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Pds5aQ6A026 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pds5aQ6A026 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.86■□□□□ 0.45
Pds5aQ6A026 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pds5aQ6A026 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Pds5aQ6A026 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pds5aQ6A026 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Pds5aQ6A026 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pds5aQ6A026 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Pds5aQ6A026 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pds5aQ6A026 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pds5aQ6A026 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms