Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ltn1Q6A009 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Gm9727-201ENSMUST00000161387 555 ntBASIC19.65■□□□□ 0.74
Ltn1Q6A009 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.65■□□□□ 0.74
Ltn1Q6A009 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ltn1Q6A009 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ltn1Q6A009 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ltn1Q6A009 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ltn1Q6A009 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ltn1Q6A009 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ltn1Q6A009 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ltn1Q6A009 Gm23935-201ENSMUST00000102303 57 ntBASIC19.64■□□□□ 0.73
Ltn1Q6A009 Gm24270-201ENSMUST00000102326 57 ntBASIC19.64■□□□□ 0.73
Ltn1Q6A009 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.64■□□□□ 0.73
Ltn1Q6A009 Gm24245-201ENSMUST00000157318 57 ntBASIC19.64■□□□□ 0.73
Ltn1Q6A009 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ltn1Q6A009 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ltn1Q6A009 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ltn1Q6A009 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ltn1Q6A009 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ltn1Q6A009 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Gm14822-201ENSMUST00000122247 291 ntBASIC19.63■□□□□ 0.73
Ltn1Q6A009 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.63■□□□□ 0.73
Ltn1Q6A009 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ltn1Q6A009 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.62■□□□□ 0.73
Ltn1Q6A009 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.62■□□□□ 0.73
Ltn1Q6A009 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ltn1Q6A009 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ltn1Q6A009 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ltn1Q6A009 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Gm9172-201ENSMUST00000212092 954 ntBASIC19.61■□□□□ 0.73
Ltn1Q6A009 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ltn1Q6A009 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ltn1Q6A009 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Gm6736-201ENSMUST00000166583 948 ntBASIC19.6■□□□□ 0.73
Ltn1Q6A009 Gm36967-201ENSMUST00000193814 266 ntBASIC19.6■□□□□ 0.73
Ltn1Q6A009 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ltn1Q6A009 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms