Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col11a2Q64739 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.1■□□□□ 0.81
Col11a2Q64739 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col11a2Q64739 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col11a2Q64739 Gm36967-201ENSMUST00000193814 266 ntBASIC20.1■□□□□ 0.81
Col11a2Q64739 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col11a2Q64739 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col11a2Q64739 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col11a2Q64739 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col11a2Q64739 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col11a2Q64739 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Col11a2Q64739 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Col11a2Q64739 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.09■□□□□ 0.81
Col11a2Q64739 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col11a2Q64739 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col11a2Q64739 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Col11a2Q64739 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.09■□□□□ 0.81
Col11a2Q64739 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col11a2Q64739 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Col11a2Q64739 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.09■□□□□ 0.81
Col11a2Q64739 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col11a2Q64739 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col11a2Q64739 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.08■□□□□ 0.81
Col11a2Q64739 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.08■□□□□ 0.81
Col11a2Q64739 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col11a2Q64739 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.08■□□□□ 0.81
Col11a2Q64739 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col11a2Q64739 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Col11a2Q64739 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Col11a2Q64739 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.08■□□□□ 0.81
Col11a2Q64739 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col11a2Q64739 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col11a2Q64739 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Mir6956-201ENSMUST00000183598 62 ntBASIC20.07■□□□□ 0.8
Col11a2Q64739 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Col11a2Q64739 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Gm15920-201ENSMUST00000118998 402 ntBASIC20.07■□□□□ 0.8
Col11a2Q64739 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.07■□□□□ 0.8
Col11a2Q64739 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.07■□□□□ 0.8
Col11a2Q64739 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.07■□□□□ 0.8
Col11a2Q64739 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Col11a2Q64739 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col11a2Q64739 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col11a2Q64739 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col11a2Q64739 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col11a2Q64739 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col11a2Q64739 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.06■□□□□ 0.8
Col11a2Q64739 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col11a2Q64739 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Col11a2Q64739 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col11a2Q64739 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col11a2Q64739 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.06■□□□□ 0.8
Col11a2Q64739 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col11a2Q64739 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.06■□□□□ 0.8
Col11a2Q64739 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col11a2Q64739 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Col11a2Q64739 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Col11a2Q64739 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col11a2Q64739 Gm27300-201ENSMUST00000184085 97 ntBASIC20.05■□□□□ 0.8
Col11a2Q64739 Gm27335-201ENSMUST00000184758 97 ntBASIC20.05■□□□□ 0.8
Col11a2Q64739 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col11a2Q64739 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col11a2Q64739 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col11a2Q64739 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col11a2Q64739 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col11a2Q64739 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col11a2Q64739 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.05■□□□□ 0.8
Col11a2Q64739 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.05■□□□□ 0.8
Col11a2Q64739 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
Col11a2Q64739 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.05■□□□□ 0.8
Col11a2Q64739 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.04■□□□□ 0.8
Col11a2Q64739 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col11a2Q64739 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col11a2Q64739 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.04■□□□□ 0.8
Col11a2Q64739 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col11a2Q64739 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col11a2Q64739 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.04■□□□□ 0.8
Col11a2Q64739 Mir6404-201ENSMUST00000183699 94 ntBASIC20.04■□□□□ 0.8
Col11a2Q64739 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.04■□□□□ 0.8
Col11a2Q64739 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Col11a2Q64739 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col11a2Q64739 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Col11a2Q64739 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Col11a2Q64739 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Col11a2Q64739 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col11a2Q64739 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col11a2Q64739 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col11a2Q64739 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Col11a2Q64739 Gm13616-201ENSMUST00000120600 222 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms