Protein–RNA interactions for Protein: Q62401

Ccl12, C-C motif chemokine 12, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl12Q62401 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl12Q62401 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl12Q62401 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl12Q62401 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccl12Q62401 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccl12Q62401 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccl12Q62401 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccl12Q62401 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccl12Q62401 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl12Q62401 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl12Q62401 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccl12Q62401 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl12Q62401 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Ccl12Q62401 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccl12Q62401 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl12Q62401 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl12Q62401 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl12Q62401 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl12Q62401 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl12Q62401 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccl12Q62401 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl12Q62401 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl12Q62401 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccl12Q62401 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccl12Q62401 Mir5130-201ENSMUST00000175160 84 ntBASIC13.29□□□□□ -0.28
Ccl12Q62401 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Ccl12Q62401 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccl12Q62401 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Ccl12Q62401 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccl12Q62401 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccl12Q62401 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl12Q62401 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Ccl12Q62401 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.28□□□□□ -0.28
Ccl12Q62401 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl12Q62401 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl12Q62401 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl12Q62401 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl12Q62401 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccl12Q62401 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccl12Q62401 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Ccl12Q62401 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl12Q62401 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ccl12Q62401 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccl12Q62401 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl12Q62401 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl12Q62401 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ccl12Q62401 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl12Q62401 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Ccl12Q62401 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl12Q62401 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl12Q62401 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl12Q62401 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.28□□□□□ -0.28
Ccl12Q62401 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl12Q62401 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccl12Q62401 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccl12Q62401 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.27□□□□□ -0.28
Ccl12Q62401 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl12Q62401 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl12Q62401 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl12Q62401 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Ccl12Q62401 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl12Q62401 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl12Q62401 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccl12Q62401 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl12Q62401 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccl12Q62401 Gm16061-201ENSMUST00000122167 857 ntBASIC13.27□□□□□ -0.29
Ccl12Q62401 Gm13474-201ENSMUST00000122466 815 ntBASIC13.27□□□□□ -0.29
Ccl12Q62401 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccl12Q62401 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl12Q62401 Gm45058-201ENSMUST00000205810 766 ntBASIC13.27□□□□□ -0.29
Ccl12Q62401 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl12Q62401 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccl12Q62401 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccl12Q62401 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccl12Q62401 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccl12Q62401 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccl12Q62401 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl12Q62401 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl12Q62401 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms