Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Six2Q62232 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Six2Q62232 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Six2Q62232 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six2Q62232 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six2Q62232 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.72■□□□□ 0.43
Six2Q62232 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six2Q62232 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six2Q62232 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six2Q62232 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six2Q62232 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six2Q62232 Mir1668-201ENSMUST00000184114 107 ntBASIC17.72■□□□□ 0.43
Six2Q62232 Gm18421-201ENSMUST00000204122 625 ntBASIC17.72■□□□□ 0.43
Six2Q62232 Gm45058-201ENSMUST00000205810 766 ntBASIC17.72■□□□□ 0.43
Six2Q62232 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.72■□□□□ 0.43
Six2Q62232 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.72■□□□□ 0.43
Six2Q62232 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six2Q62232 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Six2Q62232 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six2Q62232 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six2Q62232 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six2Q62232 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Six2Q62232 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.71■□□□□ 0.43
Six2Q62232 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Mir5130-201ENSMUST00000175160 84 ntBASIC17.71■□□□□ 0.43
Six2Q62232 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.71■□□□□ 0.43
Six2Q62232 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Six2Q62232 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Six2Q62232 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Six2Q62232 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.71■□□□□ 0.43
Six2Q62232 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.71■□□□□ 0.43
Six2Q62232 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six2Q62232 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Six2Q62232 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Six2Q62232 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Six2Q62232 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Six2Q62232 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Six2Q62232 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six2Q62232 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Six2Q62232 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.69■□□□□ 0.42
Six2Q62232 Gm11336-201ENSMUST00000118168 334 ntBASIC17.69■□□□□ 0.42
Six2Q62232 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.69■□□□□ 0.42
Six2Q62232 Mir6982-201ENSMUST00000184354 68 ntBASIC17.69■□□□□ 0.42
Six2Q62232 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.69■□□□□ 0.42
Six2Q62232 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six2Q62232 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms