Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn9aQ62205 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn9aQ62205 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn9aQ62205 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.53■□□□□ 0.72
Scn9aQ62205 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn9aQ62205 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn9aQ62205 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Scn9aQ62205 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.53■□□□□ 0.72
Scn9aQ62205 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn9aQ62205 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.53■□□□□ 0.72
Scn9aQ62205 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scn9aQ62205 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scn9aQ62205 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.52■□□□□ 0.72
Scn9aQ62205 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scn9aQ62205 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.52■□□□□ 0.72
Scn9aQ62205 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn9aQ62205 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn9aQ62205 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.52■□□□□ 0.72
Scn9aQ62205 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.52■□□□□ 0.72
Scn9aQ62205 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Scn9aQ62205 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn9aQ62205 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn9aQ62205 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Scn9aQ62205 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn9aQ62205 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scn9aQ62205 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.52■□□□□ 0.72
Scn9aQ62205 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.52■□□□□ 0.72
Scn9aQ62205 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn9aQ62205 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Scn9aQ62205 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn9aQ62205 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Scn9aQ62205 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn9aQ62205 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scn9aQ62205 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.52■□□□□ 0.71
Scn9aQ62205 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.51■□□□□ 0.71
Scn9aQ62205 Mir8117-201ENSMUST00000184773 107 ntBASIC19.51■□□□□ 0.71
Scn9aQ62205 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scn9aQ62205 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Scn9aQ62205 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn9aQ62205 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Scn9aQ62205 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scn9aQ62205 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.5■□□□□ 0.71
Scn9aQ62205 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Scn9aQ62205 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.5■□□□□ 0.71
Scn9aQ62205 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Gm7222-201ENSMUST00000117512 906 ntBASIC19.5■□□□□ 0.71
Scn9aQ62205 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Scn9aQ62205 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.5■□□□□ 0.71
Scn9aQ62205 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scn9aQ62205 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn9aQ62205 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Scn9aQ62205 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.49■□□□□ 0.71
Scn9aQ62205 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.49■□□□□ 0.71
Scn9aQ62205 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn9aQ62205 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scn9aQ62205 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn9aQ62205 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn9aQ62205 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn9aQ62205 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scn9aQ62205 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.48■□□□□ 0.71
Scn9aQ62205 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Scn9aQ62205 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.48■□□□□ 0.71
Scn9aQ62205 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn9aQ62205 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.48■□□□□ 0.71
Scn9aQ62205 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn9aQ62205 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.48■□□□□ 0.71
Scn9aQ62205 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn9aQ62205 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn9aQ62205 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.48■□□□□ 0.71
Scn9aQ62205 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Scn9aQ62205 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn9aQ62205 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn9aQ62205 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn9aQ62205 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn9aQ62205 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scn9aQ62205 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Scn9aQ62205 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.48■□□□□ 0.71
Scn9aQ62205 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.48■□□□□ 0.71
Scn9aQ62205 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn9aQ62205 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.48■□□□□ 0.71
Scn9aQ62205 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.48■□□□□ 0.71
Scn9aQ62205 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Scn9aQ62205 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scn9aQ62205 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Scn9aQ62205 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Scn9aQ62205 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scn9aQ62205 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms