Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.57■□□□□ 0.08
VcanQ62059 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.57■□□□□ 0.08
VcanQ62059 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.57■□□□□ 0.08
VcanQ62059 Gm44450-201ENSMUST00000199528 114 ntBASIC15.57■□□□□ 0.08
VcanQ62059 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VcanQ62059 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VcanQ62059 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.56■□□□□ 0.08
VcanQ62059 Gm5312-201ENSMUST00000203728 547 ntBASIC15.56■□□□□ 0.08
VcanQ62059 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.56■□□□□ 0.08
VcanQ62059 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.56■□□□□ 0.08
VcanQ62059 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.56■□□□□ 0.08
VcanQ62059 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.56■□□□□ 0.08
VcanQ62059 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
VcanQ62059 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VcanQ62059 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VcanQ62059 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VcanQ62059 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.55■□□□□ 0.08
VcanQ62059 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VcanQ62059 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VcanQ62059 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VcanQ62059 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VcanQ62059 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
VcanQ62059 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VcanQ62059 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VcanQ62059 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VcanQ62059 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.55■□□□□ 0.08
VcanQ62059 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VcanQ62059 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VcanQ62059 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VcanQ62059 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.55■□□□□ 0.08
VcanQ62059 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VcanQ62059 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
VcanQ62059 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VcanQ62059 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.55■□□□□ 0.08
VcanQ62059 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VcanQ62059 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VcanQ62059 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VcanQ62059 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
VcanQ62059 Gm7506-201ENSMUST00000207758 815 ntBASIC15.55■□□□□ 0.08
VcanQ62059 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.54■□□□□ 0.08
VcanQ62059 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Rarb-207ENSMUST00000225921 2756 ntBASIC15.54■□□□□ 0.08
VcanQ62059 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.54■□□□□ 0.08
VcanQ62059 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VcanQ62059 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
VcanQ62059 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VcanQ62059 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VcanQ62059 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VcanQ62059 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms