Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd47Q61735 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd47Q61735 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd47Q61735 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd47Q61735 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cd47Q61735 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cd47Q61735 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.14■□□□□ 0.01
Cd47Q61735 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cd47Q61735 Gm38027-201ENSMUST00000192315 235 ntBASIC15.14■□□□□ 0.01
Cd47Q61735 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.14■□□□□ 0.01
Cd47Q61735 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cd47Q61735 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cd47Q61735 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.14■□□□□ 0.01
Cd47Q61735 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd47Q61735 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Cd47Q61735 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.13■□□□□ 0.01
Cd47Q61735 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.13■□□□□ 0.01
Cd47Q61735 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Gm7638-201ENSMUST00000121348 967 ntBASIC15.13■□□□□ 0.01
Cd47Q61735 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Cd47Q61735 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.13■□□□□ 0.01
Cd47Q61735 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.13■□□□□ 0.01
Cd47Q61735 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.13■□□□□ 0.01
Cd47Q61735 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Cd47Q61735 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd47Q61735 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.12■□□□□ 0.01
Cd47Q61735 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.12■□□□□ 0.01
Cd47Q61735 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd47Q61735 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cd47Q61735 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cd47Q61735 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd47Q61735 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.12■□□□□ 0.01
Cd47Q61735 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd47Q61735 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd47Q61735 Gm8520-201ENSMUST00000186517 868 ntBASIC15.12■□□□□ 0.01
Cd47Q61735 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.12■□□□□ 0.01
Cd47Q61735 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd47Q61735 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cd47Q61735 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cd47Q61735 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd47Q61735 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd47Q61735 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd47Q61735 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd47Q61735 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd47Q61735 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd47Q61735 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cd47Q61735 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd47Q61735 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.11■□□□□ 0.01
Cd47Q61735 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd47Q61735 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd47Q61735 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd47Q61735 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.11■□□□□ 0.01
Cd47Q61735 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.11■□□□□ 0.01
Cd47Q61735 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cd47Q61735 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cd47Q61735 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd47Q61735 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.11■□□□□ 0.01
Cd47Q61735 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.11■□□□□ 0.01
Cd47Q61735 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.11■□□□□ 0.01
Cd47Q61735 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd47Q61735 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cd47Q61735 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cd47Q61735 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd47Q61735 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cd47Q61735 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd47Q61735 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms