Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sox17Q61473 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sox17Q61473 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.66■□□□□ 0.1
Sox17Q61473 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Sox17Q61473 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Sox17Q61473 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.66■□□□□ 0.1
Sox17Q61473 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sox17Q61473 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sox17Q61473 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.66■□□□□ 0.1
Sox17Q61473 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox17Q61473 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.66■□□□□ 0.1
Sox17Q61473 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Sox17Q61473 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sox17Q61473 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox17Q61473 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Sox17Q61473 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
Sox17Q61473 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sox17Q61473 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.65■□□□□ 0.1
Sox17Q61473 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Sox17Q61473 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Sox17Q61473 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sox17Q61473 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.65■□□□□ 0.1
Sox17Q61473 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox17Q61473 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sox17Q61473 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox17Q61473 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Sox17Q61473 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox17Q61473 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox17Q61473 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sox17Q61473 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.64■□□□□ 0.09
Sox17Q61473 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox17Q61473 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox17Q61473 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.64■□□□□ 0.09
Sox17Q61473 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.64■□□□□ 0.09
Sox17Q61473 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox17Q61473 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.64■□□□□ 0.09
Sox17Q61473 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox17Q61473 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Sox17Q61473 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.64■□□□□ 0.09
Sox17Q61473 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox17Q61473 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox17Q61473 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox17Q61473 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox17Q61473 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Sox17Q61473 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox17Q61473 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Sox17Q61473 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.63■□□□□ 0.09
Sox17Q61473 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.63■□□□□ 0.09
Sox17Q61473 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Sox17Q61473 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox17Q61473 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox17Q61473 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox17Q61473 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox17Q61473 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.62■□□□□ 0.09
Sox17Q61473 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms