Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Birc2-201ENSMUST00000054878 378 ntBASIC20.67■□□□□ 0.9
Irf9Q61179 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.67■□□□□ 0.9
Irf9Q61179 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.67■□□□□ 0.9
Irf9Q61179 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.67■□□□□ 0.9
Irf9Q61179 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Irf9Q61179 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf9Q61179 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf9Q61179 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Irf9Q61179 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf9Q61179 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf9Q61179 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Irf9Q61179 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf9Q61179 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.66■□□□□ 0.9
Irf9Q61179 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Irf9Q61179 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.66■□□□□ 0.9
Irf9Q61179 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf9Q61179 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Irf9Q61179 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf9Q61179 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf9Q61179 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Irf9Q61179 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Irf9Q61179 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf9Q61179 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Irf9Q61179 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Irf9Q61179 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Irf9Q61179 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Irf9Q61179 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Irf9Q61179 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.65■□□□□ 0.9
Irf9Q61179 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Irf9Q61179 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Irf9Q61179 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Irf9Q61179 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.65■□□□□ 0.9
Irf9Q61179 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Irf9Q61179 Gm15372-201ENSMUST00000120729 834 ntBASIC20.65■□□□□ 0.9
Irf9Q61179 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Irf9Q61179 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.65■□□□□ 0.9
Irf9Q61179 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Irf9Q61179 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.65■□□□□ 0.9
Irf9Q61179 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.65■□□□□ 0.9
Irf9Q61179 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Irf9Q61179 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Irf9Q61179 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Irf9Q61179 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Irf9Q61179 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Irf9Q61179 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Irf9Q61179 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Irf9Q61179 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.64■□□□□ 0.89
Irf9Q61179 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Irf9Q61179 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Irf9Q61179 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.64■□□□□ 0.89
Irf9Q61179 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Irf9Q61179 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Irf9Q61179 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.64■□□□□ 0.89
Irf9Q61179 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Irf9Q61179 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Irf9Q61179 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.63■□□□□ 0.89
Irf9Q61179 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Irf9Q61179 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Irf9Q61179 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Irf9Q61179 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.63■□□□□ 0.89
Irf9Q61179 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Irf9Q61179 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Irf9Q61179 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Irf9Q61179 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Irf9Q61179 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Irf9Q61179 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Irf9Q61179 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Irf9Q61179 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.62■□□□□ 0.89
Irf9Q61179 Rprl3-201ENSMUST00000157400 290 ntBASIC20.62■□□□□ 0.89
Irf9Q61179 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Irf9Q61179 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Irf9Q61179 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Irf9Q61179 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Irf9Q61179 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms