Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdf4Q61112 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdf4Q61112 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Sdf4Q61112 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Sdf4Q61112 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sdf4Q61112 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.87■□□□□ 0.29
Sdf4Q61112 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.87■□□□□ 0.29
Sdf4Q61112 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sdf4Q61112 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.87■□□□□ 0.29
Sdf4Q61112 Gm18115-201ENSMUST00000221209 621 ntBASIC16.87■□□□□ 0.29
Sdf4Q61112 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sdf4Q61112 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdf4Q61112 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sdf4Q61112 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdf4Q61112 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sdf4Q61112 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sdf4Q61112 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.86■□□□□ 0.29
Sdf4Q61112 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.86■□□□□ 0.29
Sdf4Q61112 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.86■□□□□ 0.29
Sdf4Q61112 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.86■□□□□ 0.29
Sdf4Q61112 Gm18101-201ENSMUST00000215769 548 ntBASIC16.86■□□□□ 0.29
Sdf4Q61112 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Gm9987-201ENSMUST00000069768 567 ntBASIC16.86■□□□□ 0.29
Sdf4Q61112 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Sdf4Q61112 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sdf4Q61112 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.85■□□□□ 0.29
Sdf4Q61112 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Gm13216-201ENSMUST00000117145 591 ntBASIC16.85■□□□□ 0.29
Sdf4Q61112 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.85■□□□□ 0.29
Sdf4Q61112 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.85■□□□□ 0.29
Sdf4Q61112 Gm27389-201ENSMUST00000183622 195 ntBASIC16.85■□□□□ 0.29
Sdf4Q61112 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.85■□□□□ 0.29
Sdf4Q61112 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.85■□□□□ 0.29
Sdf4Q61112 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sdf4Q61112 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.85■□□□□ 0.29
Sdf4Q61112 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sdf4Q61112 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Sdf4Q61112 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.84■□□□□ 0.29
Sdf4Q61112 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.84■□□□□ 0.29
Sdf4Q61112 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sdf4Q61112 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sdf4Q61112 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sdf4Q61112 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sdf4Q61112 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sdf4Q61112 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sdf4Q61112 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sdf4Q61112 Gm26039-201ENSMUST00000158152 144 ntBASIC16.83■□□□□ 0.28
Sdf4Q61112 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.83■□□□□ 0.28
Sdf4Q61112 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sdf4Q61112 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sdf4Q61112 Mir7071-201ENSMUST00000184847 69 ntBASIC16.83■□□□□ 0.28
Sdf4Q61112 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sdf4Q61112 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.83■□□□□ 0.28
Sdf4Q61112 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms