Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ripk1Q60855 Gm13216-201ENSMUST00000117145 591 ntBASIC15.68■□□□□ 0.1
Ripk1Q60855 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.68■□□□□ 0.1
Ripk1Q60855 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ripk1Q60855 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ripk1Q60855 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ripk1Q60855 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ripk1Q60855 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.68■□□□□ 0.1
Ripk1Q60855 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ripk1Q60855 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.68■□□□□ 0.1
Ripk1Q60855 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ripk1Q60855 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ripk1Q60855 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.68■□□□□ 0.1
Ripk1Q60855 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.68■□□□□ 0.1
Ripk1Q60855 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ripk1Q60855 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ripk1Q60855 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ripk1Q60855 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Ripk1Q60855 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.67■□□□□ 0.1
Ripk1Q60855 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.67■□□□□ 0.1
Ripk1Q60855 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.67■□□□□ 0.1
Ripk1Q60855 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.67■□□□□ 0.1
Ripk1Q60855 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ripk1Q60855 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.67■□□□□ 0.1
Ripk1Q60855 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ripk1Q60855 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ripk1Q60855 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.66■□□□□ 0.1
Ripk1Q60855 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ripk1Q60855 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.66■□□□□ 0.1
Ripk1Q60855 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.66■□□□□ 0.1
Ripk1Q60855 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.66■□□□□ 0.1
Ripk1Q60855 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ripk1Q60855 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ripk1Q60855 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ripk1Q60855 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.65■□□□□ 0.1
Ripk1Q60855 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.65■□□□□ 0.1
Ripk1Q60855 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.65■□□□□ 0.1
Ripk1Q60855 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.65■□□□□ 0.1
Ripk1Q60855 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Ripk1Q60855 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ripk1Q60855 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.65■□□□□ 0.1
Ripk1Q60855 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ripk1Q60855 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.64■□□□□ 0.1
Ripk1Q60855 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.64■□□□□ 0.09
Ripk1Q60855 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ripk1Q60855 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ripk1Q60855 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ripk1Q60855 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ripk1Q60855 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ripk1Q60855 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ripk1Q60855 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ripk1Q60855 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ripk1Q60855 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ripk1Q60855 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms