Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm17968-201ENSMUST00000194902 784 ntBASIC16.4■□□□□ 0.22
Col12a1Q60847 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col12a1Q60847 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col12a1Q60847 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col12a1Q60847 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.4■□□□□ 0.22
Col12a1Q60847 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Col12a1Q60847 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.22
Col12a1Q60847 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.39■□□□□ 0.21
Col12a1Q60847 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.39■□□□□ 0.21
Col12a1Q60847 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.39■□□□□ 0.21
Col12a1Q60847 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Gm27646-201ENSMUST00000183989 110 ntBASIC16.39■□□□□ 0.21
Col12a1Q60847 Gm44335-201ENSMUST00000196879 141 ntBASIC16.39■□□□□ 0.21
Col12a1Q60847 Gm44297-201ENSMUST00000198304 141 ntBASIC16.39■□□□□ 0.21
Col12a1Q60847 Gm44346-201ENSMUST00000198851 141 ntBASIC16.39■□□□□ 0.21
Col12a1Q60847 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.39■□□□□ 0.21
Col12a1Q60847 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Col12a1Q60847 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.39■□□□□ 0.21
Col12a1Q60847 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col12a1Q60847 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.39■□□□□ 0.21
Col12a1Q60847 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Col12a1Q60847 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col12a1Q60847 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col12a1Q60847 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Col12a1Q60847 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col12a1Q60847 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Col12a1Q60847 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Col12a1Q60847 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col12a1Q60847 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col12a1Q60847 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col12a1Q60847 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col12a1Q60847 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.38■□□□□ 0.21
Col12a1Q60847 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col12a1Q60847 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col12a1Q60847 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.38■□□□□ 0.21
Col12a1Q60847 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col12a1Q60847 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col12a1Q60847 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.37■□□□□ 0.21
Col12a1Q60847 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col12a1Q60847 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col12a1Q60847 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col12a1Q60847 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.37■□□□□ 0.21
Col12a1Q60847 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.37■□□□□ 0.21
Col12a1Q60847 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.37■□□□□ 0.21
Col12a1Q60847 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col12a1Q60847 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col12a1Q60847 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col12a1Q60847 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.37■□□□□ 0.21
Col12a1Q60847 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.37■□□□□ 0.21
Col12a1Q60847 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col12a1Q60847 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Col12a1Q60847 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.37■□□□□ 0.21
Col12a1Q60847 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.37■□□□□ 0.21
Col12a1Q60847 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.36■□□□□ 0.21
Col12a1Q60847 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col12a1Q60847 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.36■□□□□ 0.21
Col12a1Q60847 Gm44492-201ENSMUST00000197012 141 ntBASIC16.36■□□□□ 0.21
Col12a1Q60847 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.36■□□□□ 0.21
Col12a1Q60847 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col12a1Q60847 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col12a1Q60847 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col12a1Q60847 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col12a1Q60847 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col12a1Q60847 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col12a1Q60847 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Col12a1Q60847 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col12a1Q60847 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col12a1Q60847 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.36■□□□□ 0.21
Col12a1Q60847 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col12a1Q60847 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col12a1Q60847 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.36■□□□□ 0.21
Col12a1Q60847 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col12a1Q60847 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.36■□□□□ 0.21
Col12a1Q60847 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.36■□□□□ 0.21
Col12a1Q60847 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col12a1Q60847 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.36■□□□□ 0.21
Col12a1Q60847 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.36■□□□□ 0.21
Col12a1Q60847 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.36■□□□□ 0.21
Col12a1Q60847 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.36■□□□□ 0.21
Col12a1Q60847 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col12a1Q60847 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Col12a1Q60847 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col12a1Q60847 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col12a1Q60847 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col12a1Q60847 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col12a1Q60847 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Col12a1Q60847 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms