Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.88■□□□□ 0.13
Nr1h4Q60641 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Gm10602-201ENSMUST00000098239 609 ntBASIC15.88■□□□□ 0.13
Nr1h4Q60641 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Gm18666-201ENSMUST00000190039 958 ntBASIC15.87■□□□□ 0.13
Nr1h4Q60641 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.87■□□□□ 0.13
Nr1h4Q60641 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nr1h4Q60641 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.86■□□□□ 0.13
Nr1h4Q60641 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nr1h4Q60641 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nr1h4Q60641 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nr1h4Q60641 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.84■□□□□ 0.13
Nr1h4Q60641 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Nr1h4Q60641 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1h4Q60641 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms