Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Gm13186-201ENSMUST00000118031 316 ntBASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Gm11539-201ENSMUST00000119837 557 ntBASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Gm7370-201ENSMUST00000219471 767 ntBASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim38Q5SZ99 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.23■□□□□ 0.35
Trim38Q5SZ99 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Gm13436-201ENSMUST00000120418 567 ntBASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim38Q5SZ99 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim38Q5SZ99 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim38Q5SZ99 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
Trim38Q5SZ99 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.21■□□□□ 0.34
Trim38Q5SZ99 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim38Q5SZ99 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim38Q5SZ99 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trim38Q5SZ99 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim38Q5SZ99 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim38Q5SZ99 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim38Q5SZ99 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim38Q5SZ99 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim38Q5SZ99 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.2■□□□□ 0.34
Trim38Q5SZ99 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms