Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-1Q5R1I8 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Tgds-204ENSMUST00000228543 1594 ntBASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav3-1Q5R1I8 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Gm11847-201ENSMUST00000125165 1119 ntBASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav3-1Q5R1I8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Gm37374-201ENSMUST00000194954 1829 ntBASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Gm10167-201ENSMUST00000150411 1479 ntBASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav3-1Q5R1I8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms