Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Haglr-201ENSMUST00000100000 2085 ntBASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav7d-3Q5R1I1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Dancr-204ENSMUST00000132389 2347 ntBASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav7d-3Q5R1I1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Gm20760-201ENSMUST00000179197 648 ntBASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav7d-3Q5R1I1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Gm9731-201ENSMUST00000209480 747 ntBASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms