Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6d-4Q5R1I0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6d-4Q5R1I0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-4Q5R1I0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav6d-4Q5R1I0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-4Q5R1I0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav6d-4Q5R1I0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-4Q5R1I0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav6d-4Q5R1I0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-4Q5R1I0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-4Q5R1I0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-4Q5R1I0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-4Q5R1I0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-4Q5R1I0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav6d-4Q5R1I0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-4Q5R1I0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6d-4Q5R1I0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav6d-4Q5R1I0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6d-4Q5R1I0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6d-4Q5R1I0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Ank2-226ENSMUST00000189368 339 ntBASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav6d-4Q5R1I0 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Gm27742-201ENSMUST00000184667 60 ntBASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-4Q5R1I0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms