Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-3Q5R1C3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3-3Q5R1C3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Gm38205-201ENSMUST00000192243 258 ntBASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3-3Q5R1C3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-3Q5R1C3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-3Q5R1C3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-3Q5R1C3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-3Q5R1C3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3-3Q5R1C3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav3-3Q5R1C3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms