Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf20Q5DTM8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf20Q5DTM8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf20Q5DTM8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf20Q5DTM8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf20Q5DTM8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf20Q5DTM8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf20Q5DTM8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf20Q5DTM8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf20Q5DTM8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Actl10-202ENSMUST00000226583 1501 ntBASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Gm43799-201ENSMUST00000201845 579 ntBASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf20Q5DTM8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Gm7213-201ENSMUST00000215977 950 ntBASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Gm18115-201ENSMUST00000221209 621 ntBASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf20Q5DTM8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf20Q5DTM8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf20Q5DTM8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf20Q5DTM8 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.77■□□□□ 0.75
Rnf20Q5DTM8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf20Q5DTM8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Phf7-203ENSMUST00000226565 1971 ntBASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Gm7889-201ENSMUST00000185591 958 ntBASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf20Q5DTM8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Mir5130-201ENSMUST00000175160 84 ntBASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Mir6982-201ENSMUST00000184354 68 ntBASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Gm18959-201ENSMUST00000208954 655 ntBASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf20Q5DTM8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.74■□□□□ 0.75
Rnf20Q5DTM8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms