Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syne3Q4FZC9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syne3Q4FZC9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syne3Q4FZC9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Syne3Q4FZC9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syne3Q4FZC9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Syne3Q4FZC9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Syne3Q4FZC9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Syne3Q4FZC9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Syne3Q4FZC9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Gm7889-201ENSMUST00000185591 958 ntBASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Gm18959-201ENSMUST00000208954 655 ntBASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Syne3Q4FZC9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Syne3Q4FZC9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Syne3Q4FZC9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Syne3Q4FZC9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Syne3Q4FZC9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Gm13474-201ENSMUST00000122466 815 ntBASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.64■□□□□ 0.41
Syne3Q4FZC9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Gm16061-201ENSMUST00000122167 857 ntBASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Gm9987-201ENSMUST00000069768 567 ntBASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.63■□□□□ 0.41
Syne3Q4FZC9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Syne3Q4FZC9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Mir5130-201ENSMUST00000175160 84 ntBASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Syne3Q4FZC9 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms