Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem40Q4FJU9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem40Q4FJU9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem40Q4FJU9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem40Q4FJU9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Tmem40Q4FJU9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.14□□□□□ -0.15
Tmem40Q4FJU9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem40Q4FJU9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem40Q4FJU9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem40Q4FJU9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem40Q4FJU9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem40Q4FJU9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tmem40Q4FJU9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Gm25007-201ENSMUST00000083808 133 ntBASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tmem40Q4FJU9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Olfr129-201ENSMUST00000122318 993 ntBASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Gm28659-201ENSMUST00000188013 759 ntBASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Gm34391-201ENSMUST00000203706 907 ntBASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tmem40Q4FJU9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Gm43514-201ENSMUST00000198852 424 ntBASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Gm6443-201ENSMUST00000203599 874 ntBASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tmem40Q4FJU9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tmem40Q4FJU9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tmem40Q4FJU9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tmem40Q4FJU9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tmem40Q4FJU9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.1□□□□□ -0.15
Tmem40Q4FJU9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tmem40Q4FJU9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tmem40Q4FJU9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms