Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Pfdn4Q3UWL8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.32■□□□□ 0.2
Pfdn4Q3UWL8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn4Q3UWL8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn4Q3UWL8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn4Q3UWL8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn4Q3UWL8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn4Q3UWL8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn4Q3UWL8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Pfdn4Q3UWL8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn4Q3UWL8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn4Q3UWL8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn4Q3UWL8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn4Q3UWL8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Gm10517-202ENSMUST00000192970 758 ntBASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.3■□□□□ 0.2
Pfdn4Q3UWL8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Gm24841-201ENSMUST00000158676 357 ntBASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn4Q3UWL8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Gm37292-201ENSMUST00000192062 758 ntBASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Gm20049-201ENSMUST00000219950 730 ntBASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn4Q3UWL8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms