Protein–RNA interactions for Protein: Q3UQU0

Brd9, Bromodomain-containing protein 9, mousemouse

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd9Q3UQU0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 Gm15372-201ENSMUST00000120729 834 ntBASIC18.56■□□□□ 0.56
Brd9Q3UQU0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brd9Q3UQU0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Brd9Q3UQU0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brd9Q3UQU0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Rprl3-201ENSMUST00000157400 290 ntBASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brd9Q3UQU0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brd9Q3UQU0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Brd9Q3UQU0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Brd9Q3UQU0 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.51■□□□□ 0.55
Brd9Q3UQU0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms