Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Gm25016-201ENSMUST00000158399 131 ntBASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nlrc4Q3UP24 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nlrc4Q3UP24 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nlrc4Q3UP24 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nlrc4Q3UP24 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Nlrc4Q3UP24 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Nlrc4Q3UP24 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nlrc4Q3UP24 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Gm29518-201ENSMUST00000190858 372 ntBASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Gm29707-201ENSMUST00000196325 491 ntBASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nlrc4Q3UP24 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nlrc4Q3UP24 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Gm17808-201ENSMUST00000200859 894 ntBASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nlrc4Q3UP24 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nlrc4Q3UP24 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.48■□□□□ 0.39
Nlrc4Q3UP24 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nlrc4Q3UP24 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nlrc4Q3UP24 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nlrc4Q3UP24 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nlrc4Q3UP24 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.48■□□□□ 0.39
Nlrc4Q3UP24 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nlrc4Q3UP24 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.48■□□□□ 0.39
Nlrc4Q3UP24 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.48■□□□□ 0.39
Nlrc4Q3UP24 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.48■□□□□ 0.39
Nlrc4Q3UP24 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nlrc4Q3UP24 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms