Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cks1brtQ3UNC9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cks1brtQ3UNC9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Gm22238-201ENSMUST00000175222 88 ntBASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Spcs1-204ENSMUST00000226782 949 ntBASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cks1brtQ3UNC9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Gm15820-201ENSMUST00000201566 728 ntBASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cks1brtQ3UNC9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cks1brtQ3UNC9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cks1brtQ3UNC9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cks1brtQ3UNC9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cks1brtQ3UNC9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms