Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.53■□□□□ 0.72
Rnf180Q3U827 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf180Q3U827 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf180Q3U827 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf180Q3U827 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf180Q3U827 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf180Q3U827 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.52■□□□□ 0.72
Rnf180Q3U827 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf180Q3U827 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf180Q3U827 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf180Q3U827 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf180Q3U827 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf180Q3U827 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf180Q3U827 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf180Q3U827 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf180Q3U827 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.52■□□□□ 0.71
Rnf180Q3U827 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf180Q3U827 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Gm25406-201ENSMUST00000157599 105 ntBASIC19.51■□□□□ 0.71
Rnf180Q3U827 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rnf180Q3U827 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf180Q3U827 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf180Q3U827 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rnf180Q3U827 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf180Q3U827 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf180Q3U827 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf180Q3U827 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.5■□□□□ 0.71
Rnf180Q3U827 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Rnf180Q3U827 Gm10253-201ENSMUST00000194270 940 ntBASIC19.5■□□□□ 0.71
Rnf180Q3U827 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.5■□□□□ 0.71
Rnf180Q3U827 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.5■□□□□ 0.71
Rnf180Q3U827 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf180Q3U827 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rnf180Q3U827 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rnf180Q3U827 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.5■□□□□ 0.71
Rnf180Q3U827 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Rnf180Q3U827 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf180Q3U827 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.5■□□□□ 0.71
Rnf180Q3U827 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf180Q3U827 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rnf180Q3U827 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC19.49■□□□□ 0.71
Rnf180Q3U827 Gm12151-201ENSMUST00000121374 290 ntBASIC19.49■□□□□ 0.71
Rnf180Q3U827 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf180Q3U827 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf180Q3U827 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf180Q3U827 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rnf180Q3U827 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.49■□□□□ 0.71
Rnf180Q3U827 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.49■□□□□ 0.71
Rnf180Q3U827 AC130829.1-201ENSMUST00000221548 494 ntBASIC19.49■□□□□ 0.71
Rnf180Q3U827 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rnf180Q3U827 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf180Q3U827 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Rnf180Q3U827 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.49■□□□□ 0.71
Rnf180Q3U827 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf180Q3U827 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rnf180Q3U827 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf180Q3U827 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rnf180Q3U827 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf180Q3U827 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf180Q3U827 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.48■□□□□ 0.71
Rnf180Q3U827 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf180Q3U827 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rnf180Q3U827 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.48■□□□□ 0.71
Rnf180Q3U827 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf180Q3U827 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC19.48■□□□□ 0.71
Rnf180Q3U827 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC19.48■□□□□ 0.71
Rnf180Q3U827 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.48■□□□□ 0.71
Rnf180Q3U827 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC19.48■□□□□ 0.71
Rnf180Q3U827 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf180Q3U827 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rnf180Q3U827 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rnf180Q3U827 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.48■□□□□ 0.71
Rnf180Q3U827 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf180Q3U827 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Mir8102-201ENSMUST00000184148 139 ntBASIC19.47■□□□□ 0.71
Rnf180Q3U827 Gm9794-201ENSMUST00000202370 423 ntBASIC19.47■□□□□ 0.71
Rnf180Q3U827 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms