Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rufy4Q3TYX8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rufy4Q3TYX8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rufy4Q3TYX8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.3■□□□□ 0.52
Rufy4Q3TYX8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rufy4Q3TYX8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rufy4Q3TYX8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rufy4Q3TYX8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rufy4Q3TYX8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rufy4Q3TYX8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rufy4Q3TYX8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rufy4Q3TYX8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rufy4Q3TYX8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rufy4Q3TYX8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Gm17971-201ENSMUST00000190239 806 ntBASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Gm18669-201ENSMUST00000216049 778 ntBASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rufy4Q3TYX8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rufy4Q3TYX8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rufy4Q3TYX8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Rufy4Q3TYX8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rufy4Q3TYX8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rufy4Q3TYX8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rufy4Q3TYX8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rufy4Q3TYX8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rufy4Q3TYX8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rufy4Q3TYX8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Rufy4Q3TYX8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rufy4Q3TYX8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rufy4Q3TYX8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rufy4Q3TYX8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rufy4Q3TYX8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rufy4Q3TYX8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rufy4Q3TYX8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms