Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Tff1Q08423 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Tff1Q08423 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.86□□□□□ -0.19
Tff1Q08423 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tff1Q08423 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tff1Q08423 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tff1Q08423 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tff1Q08423 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tff1Q08423 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tff1Q08423 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Tff1Q08423 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tff1Q08423 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tff1Q08423 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tff1Q08423 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Tff1Q08423 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tff1Q08423 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tff1Q08423 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tff1Q08423 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tff1Q08423 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tff1Q08423 Gm13216-201ENSMUST00000117145 591 ntBASIC13.85□□□□□ -0.19
Tff1Q08423 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tff1Q08423 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tff1Q08423 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tff1Q08423 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Tff1Q08423 Gm10819-201ENSMUST00000099988 561 ntBASIC13.85□□□□□ -0.19
Tff1Q08423 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tff1Q08423 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tff1Q08423 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.85□□□□□ -0.19
Tff1Q08423 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tff1Q08423 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Tff1Q08423 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tff1Q08423 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.84□□□□□ -0.19
Tff1Q08423 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.84□□□□□ -0.19
Tff1Q08423 Gm12382-201ENSMUST00000122005 922 ntBASIC13.84□□□□□ -0.19
Tff1Q08423 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.84□□□□□ -0.19
Tff1Q08423 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Gm37292-201ENSMUST00000192062 758 ntBASIC13.84□□□□□ -0.19
Tff1Q08423 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.84□□□□□ -0.19
Tff1Q08423 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.84□□□□□ -0.19
Tff1Q08423 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Gm7367-201ENSMUST00000057611 492 ntBASIC13.84□□□□□ -0.19
Tff1Q08423 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tff1Q08423 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tff1Q08423 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tff1Q08423 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.83□□□□□ -0.19
Tff1Q08423 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Tff1Q08423 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.83□□□□□ -0.2
Tff1Q08423 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.83□□□□□ -0.2
Tff1Q08423 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.83□□□□□ -0.2
Tff1Q08423 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.83□□□□□ -0.2
Tff1Q08423 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Gm10517-202ENSMUST00000192970 758 ntBASIC13.83□□□□□ -0.2
Tff1Q08423 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Tff1Q08423 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.83□□□□□ -0.2
Tff1Q08423 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Tff1Q08423 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Tff1Q08423 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Tff1Q08423 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Tff1Q08423 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.82□□□□□ -0.2
Tff1Q08423 Gm30025-201ENSMUST00000218555 728 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms