Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col1a2Q01149 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col1a2Q01149 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Col1a2Q01149 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.77■□□□□ 0.92
Col1a2Q01149 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Col1a2Q01149 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col1a2Q01149 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.77■□□□□ 0.92
Col1a2Q01149 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.77■□□□□ 0.92
Col1a2Q01149 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.77■□□□□ 0.92
Col1a2Q01149 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col1a2Q01149 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col1a2Q01149 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col1a2Q01149 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col1a2Q01149 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col1a2Q01149 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col1a2Q01149 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col1a2Q01149 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Col1a2Q01149 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.76■□□□□ 0.91
Col1a2Q01149 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col1a2Q01149 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col1a2Q01149 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.76■□□□□ 0.91
Col1a2Q01149 Rps4l-201ENSMUST00000071745 943 ntBASIC20.76■□□□□ 0.91
Col1a2Q01149 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Col1a2Q01149 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col1a2Q01149 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.76■□□□□ 0.91
Col1a2Q01149 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col1a2Q01149 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col1a2Q01149 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col1a2Q01149 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Col1a2Q01149 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col1a2Q01149 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col1a2Q01149 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Col1a2Q01149 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.75■□□□□ 0.91
Col1a2Q01149 Gm11452-201ENSMUST00000122376 690 ntBASIC20.75■□□□□ 0.91
Col1a2Q01149 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col1a2Q01149 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Col1a2Q01149 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
Col1a2Q01149 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col1a2Q01149 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col1a2Q01149 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Col1a2Q01149 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.75■□□□□ 0.91
Col1a2Q01149 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col1a2Q01149 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col1a2Q01149 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Col1a2Q01149 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col1a2Q01149 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col1a2Q01149 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Col1a2Q01149 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Col1a2Q01149 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Col1a2Q01149 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.74■□□□□ 0.91
Col1a2Q01149 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.74■□□□□ 0.91
Col1a2Q01149 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.74■□□□□ 0.91
Col1a2Q01149 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col1a2Q01149 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col1a2Q01149 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col1a2Q01149 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col1a2Q01149 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col1a2Q01149 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col1a2Q01149 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Col1a2Q01149 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col1a2Q01149 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col1a2Q01149 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Col1a2Q01149 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.74■□□□□ 0.91
Col1a2Q01149 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col1a2Q01149 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col1a2Q01149 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col1a2Q01149 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col1a2Q01149 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Col1a2Q01149 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.73■□□□□ 0.91
Col1a2Q01149 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.73■□□□□ 0.91
Col1a2Q01149 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col1a2Q01149 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col1a2Q01149 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Col1a2Q01149 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Col1a2Q01149 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.73■□□□□ 0.91
Col1a2Q01149 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col1a2Q01149 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Col1a2Q01149 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col1a2Q01149 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col1a2Q01149 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Col1a2Q01149 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col1a2Q01149 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col1a2Q01149 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col1a2Q01149 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.72■□□□□ 0.91
Col1a2Q01149 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.72■□□□□ 0.91
Col1a2Q01149 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col1a2Q01149 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Col1a2Q01149 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col1a2Q01149 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
Col1a2Q01149 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.72■□□□□ 0.91
Col1a2Q01149 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Col1a2Q01149 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col1a2Q01149 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Col1a2Q01149 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col1a2Q01149 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Col1a2Q01149 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.72■□□□□ 0.91
Col1a2Q01149 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.72■□□□□ 0.91
Col1a2Q01149 Gm6296-201ENSMUST00000222599 943 ntBASIC20.72■□□□□ 0.91
Col1a2Q01149 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col1a2Q01149 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms