Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-3P97334 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-3P97334 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.91■□□□□ 0.94
Nkx2-3P97334 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-3P97334 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-3P97334 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-3P97334 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-3P97334 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.91■□□□□ 0.94
Nkx2-3P97334 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.91■□□□□ 0.94
Nkx2-3P97334 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-3P97334 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-3P97334 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-3P97334 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-3P97334 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-3P97334 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-3P97334 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-3P97334 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-3P97334 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.9■□□□□ 0.94
Nkx2-3P97334 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-3P97334 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Nkx2-3P97334 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-3P97334 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-3P97334 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-3P97334 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-3P97334 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-3P97334 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.89■□□□□ 0.93
Nkx2-3P97334 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Nkx2-3P97334 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-3P97334 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Nkx2-3P97334 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.89■□□□□ 0.93
Nkx2-3P97334 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-3P97334 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-3P97334 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Gm25990-201ENSMUST00000102440 86 ntBASIC20.88■□□□□ 0.93
Nkx2-3P97334 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.88■□□□□ 0.93
Nkx2-3P97334 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-3P97334 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-3P97334 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-3P97334 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-3P97334 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-3P97334 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Nkx2-3P97334 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nkx2-3P97334 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.87■□□□□ 0.93
Nkx2-3P97334 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.87■□□□□ 0.93
Nkx2-3P97334 Gm36967-201ENSMUST00000193814 266 ntBASIC20.87■□□□□ 0.93
Nkx2-3P97334 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.87■□□□□ 0.93
Nkx2-3P97334 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.87■□□□□ 0.93
Nkx2-3P97334 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-3P97334 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-3P97334 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-3P97334 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-3P97334 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-3P97334 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-3P97334 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-3P97334 Mir5126-201ENSMUST00000175513 77 ntBASIC20.86■□□□□ 0.93
Nkx2-3P97334 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.86■□□□□ 0.93
Nkx2-3P97334 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-3P97334 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-3P97334 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Nkx2-3P97334 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-3P97334 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-3P97334 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-3P97334 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.85■□□□□ 0.93
Nkx2-3P97334 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms