Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.37□□□□□ -0.59
PrkdcP97313 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.37□□□□□ -0.59
PrkdcP97313 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.37□□□□□ -0.59
PrkdcP97313 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.37□□□□□ -0.59
PrkdcP97313 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Gm22175-201ENSMUST00000175007 78 ntBASIC11.37□□□□□ -0.59
PrkdcP97313 Gm25948-201ENSMUST00000175334 112 ntBASIC11.37□□□□□ -0.59
PrkdcP97313 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.37□□□□□ -0.59
PrkdcP97313 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.37□□□□□ -0.59
PrkdcP97313 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC11.37□□□□□ -0.59
PrkdcP97313 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PrkdcP97313 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Gm45612-201ENSMUST00000211320 160 ntBASIC11.37□□□□□ -0.59
PrkdcP97313 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PrkdcP97313 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PrkdcP97313 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
PrkdcP97313 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PrkdcP97313 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.36□□□□□ -0.59
PrkdcP97313 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.36□□□□□ -0.59
PrkdcP97313 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PrkdcP97313 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
PrkdcP97313 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PrkdcP97313 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PrkdcP97313 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
PrkdcP97313 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.36□□□□□ -0.59
PrkdcP97313 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PrkdcP97313 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.36□□□□□ -0.59
PrkdcP97313 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PrkdcP97313 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PrkdcP97313 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PrkdcP97313 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PrkdcP97313 Mir6990-201ENSMUST00000183724 91 ntBASIC11.36□□□□□ -0.59
PrkdcP97313 Gm45747-201ENSMUST00000212203 999 ntBASIC11.36□□□□□ -0.59
PrkdcP97313 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PrkdcP97313 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
PrkdcP97313 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.35□□□□□ -0.59
PrkdcP97313 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
PrkdcP97313 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.35□□□□□ -0.59
PrkdcP97313 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
PrkdcP97313 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC11.35□□□□□ -0.59
PrkdcP97313 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.35□□□□□ -0.59
PrkdcP97313 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
PrkdcP97313 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
PrkdcP97313 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.35□□□□□ -0.59
PrkdcP97313 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.35□□□□□ -0.59
PrkdcP97313 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
PrkdcP97313 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.34□□□□□ -0.59
PrkdcP97313 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PrkdcP97313 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.34□□□□□ -0.59
PrkdcP97313 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PrkdcP97313 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PrkdcP97313 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.34□□□□□ -0.59
PrkdcP97313 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
PrkdcP97313 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PrkdcP97313 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.34□□□□□ -0.59
PrkdcP97313 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PrkdcP97313 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PrkdcP97313 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.34□□□□□ -0.59
PrkdcP97313 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PrkdcP97313 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PrkdcP97313 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PrkdcP97313 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC11.34□□□□□ -0.59
PrkdcP97313 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
PrkdcP97313 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
PrkdcP97313 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
PrkdcP97313 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.33□□□□□ -0.59
PrkdcP97313 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.33□□□□□ -0.59
PrkdcP97313 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.33□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms