Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
SgcbP82349 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SgcbP82349 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.84□□□□□ -0.03
SgcbP82349 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.84□□□□□ -0.03
SgcbP82349 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
SgcbP82349 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SgcbP82349 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SgcbP82349 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
SgcbP82349 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SgcbP82349 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.83□□□□□ -0.03
SgcbP82349 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SgcbP82349 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
SgcbP82349 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SgcbP82349 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SgcbP82349 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SgcbP82349 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.83□□□□□ -0.04
SgcbP82349 Gm9013-201ENSMUST00000132939 882 ntBASIC14.83□□□□□ -0.04
SgcbP82349 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.83□□□□□ -0.04
SgcbP82349 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.83□□□□□ -0.04
SgcbP82349 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.83□□□□□ -0.04
SgcbP82349 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SgcbP82349 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SgcbP82349 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcbP82349 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SgcbP82349 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SgcbP82349 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SgcbP82349 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcbP82349 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SgcbP82349 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcbP82349 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcbP82349 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcbP82349 Gm13186-201ENSMUST00000118031 316 ntBASIC14.82□□□□□ -0.04
SgcbP82349 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcbP82349 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.82□□□□□ -0.04
SgcbP82349 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcbP82349 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.82□□□□□ -0.04
SgcbP82349 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SgcbP82349 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
SgcbP82349 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.82□□□□□ -0.04
SgcbP82349 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcbP82349 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SgcbP82349 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.81□□□□□ -0.04
SgcbP82349 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.81□□□□□ -0.04
SgcbP82349 Gm11336-201ENSMUST00000118168 334 ntBASIC14.81□□□□□ -0.04
SgcbP82349 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.81□□□□□ -0.04
SgcbP82349 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.81□□□□□ -0.04
SgcbP82349 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.81□□□□□ -0.04
SgcbP82349 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SgcbP82349 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms